Human (GRCh37.p13)
Description

class II, major histocompatibility complex, transactivator [Source:HGNC Symbol;Acc:7067]

Gene Synonyms

C2TA, CIITAIV, MHC2TA, NLRA

Location
About this transcript

This transcript has 20 exons, is annotated with 36 domains and features, is associated with 28419 variant alleles and maps to 847 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000324288.8CIITA-00194381130aaENSP00000316328.8
 
Protein coding
CCDS10544I3L2E5 P33076 NM_001286402.1GENCODE basic
ENST00000381835.5CIITA-0022344546aaENSP00000371257.5
 
Protein coding
CCDS66943E9PFE0 NM_001286403.1GENCODE basic
ENST00000576601.1CIITA-008626177aaENSP00000459608.1
 
Protein coding
I3L2E5 -CDS 3' incomplete
ENST00000571186.1CIITA-0061041172aaENSP00000459829.1
 
Nonsense mediated decay
I3L2P7 --
ENST00000537380.1CIITA-0051062No protein-
 
Processed transcript
---
ENST00000571545.1CIITA-012567No protein-
 
Processed transcript
---
ENST00000572665.1CIITA-009560No protein-
 
Processed transcript
---
ENST00000570546.1CIITA-0035342No protein-
 
Retained intron
---
ENST00000573309.1CIITA-0043366No protein-
 
Retained intron
---
ENST00000575513.1CIITA-010516No protein-
 
Retained intron
---
ENST00000571190.1CIITA-007479No protein-
 
Retained intron
---
Statistics

Exons: 20, Coding exons: 19, Transcript length: 9,438 bps, Translation length: 1,130 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P33076

CCDS

This transcript is a member of the Human CCDS set: CCDS10544

Version

ENST00000324288.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000251966 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.