Human (GRCh37.p13)
Description

class II, major histocompatibility complex, transactivator [Source:HGNC Symbol;Acc:7067]

Gene Synonyms

C2TA, CIITAIV, MHC2TA, NLRA

Location
About this transcript

This transcript has 1 exon, is associated with 288 variant alleles and maps to 115 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000324288.8CIITA-00194381130aaENSP00000316328.8
 
Protein coding
CCDS10544I3L2E5 P33076 NM_001286402.1GENCODE basic
ENST00000381835.5CIITA-0022344546aaENSP00000371257.5
 
Protein coding
CCDS66943E9PFE0 NM_001286403.1GENCODE basic
ENST00000576601.1CIITA-008626177aaENSP00000459608.1
 
Protein coding
I3L2E5 -CDS 3' incomplete
ENST00000571186.1CIITA-0061041172aaENSP00000459829.1
 
Nonsense mediated decay
I3L2P7 --
ENST00000537380.1CIITA-0051062No protein-
 
Processed transcript
---
ENST00000571545.1CIITA-012567No protein-
 
Processed transcript
---
ENST00000572665.1CIITA-009560No protein-
 
Processed transcript
---
ENST00000570546.1CIITA-0035342No protein-
 
Retained intron
---
ENST00000573309.1CIITA-0043366No protein-
 
Retained intron
---
ENST00000575513.1CIITA-010516No protein-
 
Retained intron
---
ENST00000571190.1CIITA-007479No protein-
 
Retained intron
---
Statistics

Exons: 1, Coding exons: 0, Transcript length: 479 bps,

Version

ENST00000571190.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000436693 (version 1)