Description
collagen, type XVI, alpha 1 [Source:HGNC Symbol;Acc:2193]
Gene Synonyms
447AA
Location
Chromosome 1: 32,117,848-32,169,768 reverse strand.
About this transcript
This transcript has 72 exons, is annotated with 38 domains and features, is associated with 23523 variant alleles and maps to 1464 oligo probes.
Gene
This transcript is a product of gene ENSG00000084636.13 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000373672.3 | COL16A1-001 | 5736 | 1604aa | ENSP00000362776.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41297 | Q07092 | NM_001856.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000271069.6 | COL16A1-201 | 5584 | 1604aa | ENSP00000271069.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NDR9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000373668.3 | COL16A1-005 | 3643 | 966aa | ENSP00000362772.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NCT7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000373667.4 | COL16A1-015 | 924 | 308aa | ENSP00000362771.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BY97 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000458715.1 | COL16A1-013 | 706 | 235aa | ENSP00000411457.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C3F0 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000440437.1 | COL16A1-017 | 672 | 224aa | ENSP00000390281.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BZL8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000461217.1 | COL16A1-003 | 852 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482478.1 | COL16A1-004 | 797 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000474000.1 | COL16A1-014 | 676 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468459.1 | COL16A1-012 | 620 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000529928.1 | COL16A1-019 | 581 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000532877.1 | COL16A1-018 | 534 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000466829.1 | COL16A1-007 | 254 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000488128.2 | COL16A1-010 | 2854 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488897.1 | COL16A1-006 | 2423 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000470799.1 | COL16A1-009 | 826 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479100.1 | COL16A1-011 | 740 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482910.1 | COL16A1-008 | 676 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |