Description
collagen, type XVI, alpha 1 [Source:HGNC Symbol;Acc:2193]
Gene Synonyms
447AA
Location
Chromosome 1: 32,138,031-32,149,349 reverse strand.
About this transcript
This transcript has 13 exons, is annotated with 9 domains and features, is associated with 4958 variant alleles and maps to 241 oligo probes.
Gene
This transcript is a product of gene ENSG00000084636.13 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000373672.3 | COL16A1-001 | 5736 | 1604aa | ENSP00000362776.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41297 | Q07092 | NM_001856.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000271069.6 | COL16A1-201 | 5584 | 1604aa | ENSP00000271069.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NDR9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000373668.3 | COL16A1-005 | 3643 | 966aa | ENSP00000362772.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NCT7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000373667.4 | COL16A1-015 | 924 | 308aa | ENSP00000362771.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BY97 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000458715.1 | COL16A1-013 | 706 | 235aa | ENSP00000411457.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C3F0 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000440437.1 | COL16A1-017 | 672 | 224aa | ENSP00000390281.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BZL8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000461217.1 | COL16A1-003 | 852 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000482478.1 | COL16A1-004 | 797 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000474000.1 | COL16A1-014 | 676 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000468459.1 | COL16A1-012 | 620 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000529928.1 | COL16A1-019 | 581 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000532877.1 | COL16A1-018 | 534 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000466829.1 | COL16A1-007 | 254 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000488128.2 | COL16A1-010 | 2854 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000488897.1 | COL16A1-006 | 2423 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000470799.1 | COL16A1-009 | 826 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000479100.1 | COL16A1-011 | 740 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000482910.1 | COL16A1-008 | 676 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |