Transcript: AMACR-001 ENST00000335606.6

Description

alpha-methylacyl-CoA racemase [Source:HGNC Symbol;Acc:451]

Gene Synonyms

AMACRD, CBAS4, RACE, RM

Location

Chromosome 5: 33,986,283-34,008,213 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 5491 variant alleles and maps to 757 oligo probes.

Gene

This transcript is a product of gene ENSG00000242110.3 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
AMACR-001	ENST00000335606.6	4153	382aa	ENSP00000334424.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3902	Q9UHK6	NM_001167595 NM_014324 NP_001161067 NP_055139	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AMACR-002	ENST00000382072.2	2919	198aa	ENSP00000371504.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3903	Q9UHK6	NM_203382 NP_976316	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AMACR-008	ENST00000382085.3	1195	394aa	ENSP00000371517.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54836	Q9UHK6	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AMACR-003	ENST00000502637.1	1598	367aa	ENSP00000424351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	D6RB81	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AMACR-004	ENST00000426255.2	1316	288aa	ENSP00000476965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AMACR-006	ENST00000382068.3	862	281aa	ENSP00000477108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AMACR-005	ENST00000512079.1	858	260aa	ENSP00000477411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AMACR-201	ENST00000441713.2	786	229aa	ENSP00000403800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	Q9UHK6	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AMACR-007	ENST00000506639.1	2182	229aa	ENSP00000427227.1	Nonsense mediated decay	-	Q9UHK6	-	-
AMACR-009	ENST00000514195.1	2052	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,153 bps, Translation length: 382 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3902

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHK6

Version

ENST00000335606.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207467 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: AMACR-001 ENST00000335606.6

Summary

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