Transcript: ENST00000382072.2 AMACR-002

Description

alpha-methylacyl-CoA racemase [Source:HGNC Symbol;Acc:451]

Gene Synonyms

AMACRD, CBAS4, RACE, RM

Location

Chromosome 5: 33,987,279-34,008,136 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 8555 variant alleles and maps to 614 oligo probes.

Gene

This transcript is a product of gene ENSG00000242110.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335606.6	AMACR-001	4153	382aa	ENSP00000334424.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3902	Q9UHK6	NM_014324.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382072.2	AMACR-002	2919	198aa	ENSP00000371504.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3903	Q9UHK6	NM_203382.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502637.1	AMACR-003	1598	367aa	ENSP00000424351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426255.2	AMACR-004	1316	288aa	ENSP00000476965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382085.3	AMACR-008	1195	394aa	ENSP00000371517.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54836	Q9UHK6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382068.3	AMACR-006	862	281aa	ENSP00000477108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512079.1	AMACR-005	858	260aa	ENSP00000477411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441713.2	AMACR-201	786	229aa	ENSP00000403800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UHK6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506639.1	AMACR-007	2182	229aa	ENSP00000427227.1	Nonsense mediated decay		Q9UHK6	-	-
ENST00000514195.1	AMACR-009	2052	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,919 bps, Translation length: 198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHK6

CCDS

This transcript is a member of the Human CCDS set: CCDS3903

Version

ENST00000382072.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207468 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000382072.2 AMACR-002

Summary