Transcript: ENST00000522726.1 MMP16-004

Description

matrix metallopeptidase 16 (membrane-inserted) [Source:HGNC Symbol;Acc:7162]

Gene Synonyms

C8orf57, DKFZp761D112, MMP-X2, MMPX2, MT-MMP2, MT-MMP3, MT3-MMP

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 70758 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000286614.6	MMP16-001	11558	607aa	ENSP00000286614.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6246	P51512	NM_005941.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522726.1	MMP16-004	551	168aa	ENSP00000429147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJA7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544227.1	MMP16-003	1512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520568.1	MMP16-005	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 551 bps, Translation length: 168 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000522726.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375307 (version 1)