Transcript: ENST00000286614.6 MMP16-001

Description

matrix metallopeptidase 16 (membrane-inserted) [Source:HGNC Symbol;Acc:7162]

Gene Synonyms

C8orf57, DKFZp761D112, MMP-X2, MMPX2, MT-MMP2, MT-MMP3, MT3-MMP

Location

About this transcript

This transcript has 10 exons, is annotated with 34 domains and features, is associated with 131425 variant alleles and maps to 957 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000286614.6	MMP16-001	11558	607aa	ENSP00000286614.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6246	P51512	NM_005941.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522726.1	MMP16-004	551	168aa	ENSP00000429147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJA7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544227.1	MMP16-003	1512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520568.1	MMP16-005	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 11,558 bps, Translation length: 607 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51512

CCDS

This transcript is a member of the Human CCDS set: CCDS6246

Version

ENST00000286614.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000375304 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.