Transcript: ENST00000520568.1 MMP16-005

Description

matrix metallopeptidase 16 (membrane-inserted) [Source:HGNC Symbol;Acc:7162]

Gene Synonyms

C8orf57, DKFZp761D112, MMP-X2, MMPX2, MT-MMP2, MT-MMP3, MT3-MMP

Location

About this transcript

This transcript has 3 exons, is associated with 61817 variant alleles and maps to 114 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000286614.6	MMP16-001	11558	607aa	ENSP00000286614.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6246	P51512	NM_005941.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522726.1	MMP16-004	551	168aa	ENSP00000429147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJA7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544227.1	MMP16-003	1512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520568.1	MMP16-005	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 605 bps,

Version

ENST00000520568.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375308 (version 1)