Description
PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:HGNC Symbol;Acc:9249]
Gene Synonyms
KIAA1230, L2, SGT2, hSGT2, hSgt2p
Location
Chromosome 12: 27,841,122-27,842,136 forward strand.
About this transcript
This transcript has 2 exons, is associated with 468 variant alleles and maps to 42 oligo probes.
Gene
This transcript is a product of gene ENSG00000110841.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000318304.8 | PPFIBP1-007 | 6001 | 1011aa | ENSP00000314724.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55812 | F5H6Q7 Q86W92 | NM_177444.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000228425.6 | PPFIBP1-001 | 5933 | 1005aa | ENSP00000228425.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8713 | F5H6Q7 Q86W92 | NM_003622.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000537927.1 | PPFIBP1-003 | 5719 | 858aa | ENSP00000445425.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55814 | Q86W92 | NM_001198915.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000542629.1 | PPFIBP1-008 | 3208 | 980aa | ENSP00000443442.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55813 | F5H6Q7 Q86W92 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000545334.1 | PPFIBP1-005 | 2805 | 109aa | ENSP00000438036.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0E0 F5H6Q7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000540114.1 | PPFIBP1-002 | 2645 | 744aa | ENSP00000444304.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZP6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539326.1 | PPFIBP1-012 | 973 | 242aa | ENSP00000438174.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000535047.1 | PPFIBP1-006 | 875 | 170aa | ENSP00000444046.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6Q7 Q86W92 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000537261.1 | PPFIBP1-016 | 616 | 205aa | ENSP00000443324.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YGH8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000538433.1 | PPFIBP1-009 | 609 | 18aa | ENSP00000442462.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542187.1 | PPFIBP1-015 | 585 | 152aa | ENSP00000445132.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H495 F5H6Q7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535575.1 | PPFIBP1-010 | 559 | 86aa | ENSP00000437438.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6Q7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545381.1 | PPFIBP1-004 | 1191 | 281aa | ENSP00000445822.1 | Non stop decay | F5H6Q7 | - | - | |
| ENST00000541633.1 | PPFIBP1-014 | 574 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000534917.1 | PPFIBP1-011 | 937 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540503.1 | PPFIBP1-017 | 566 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540256.1 | PPFIBP1-013 | 424 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |