Description
PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:HGNC Symbol;Acc:9249]
Gene Synonyms
KIAA1230, L2, SGT2, hSGT2, hSgt2p
Location
Chromosome 12: 27,677,189-27,848,497 forward strand.
About this transcript
This transcript has 30 exons, is annotated with 26 domains and features, is associated with 68010 variant alleles and maps to 1215 oligo probes.
Gene
This transcript is a product of gene ENSG00000110841.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000318304.8 | PPFIBP1-007 | 6001 | 1011aa | ENSP00000314724.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55812 | F5H6Q7 Q86W92 | NM_177444.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000228425.6 | PPFIBP1-001 | 5933 | 1005aa | ENSP00000228425.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8713 | F5H6Q7 Q86W92 | NM_003622.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000537927.1 | PPFIBP1-003 | 5719 | 858aa | ENSP00000445425.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55814 | Q86W92 | NM_001198915.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000542629.1 | PPFIBP1-008 | 3208 | 980aa | ENSP00000443442.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55813 | F5H6Q7 Q86W92 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000545334.1 | PPFIBP1-005 | 2805 | 109aa | ENSP00000438036.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0E0 F5H6Q7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000540114.1 | PPFIBP1-002 | 2645 | 744aa | ENSP00000444304.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZP6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539326.1 | PPFIBP1-012 | 973 | 242aa | ENSP00000438174.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000535047.1 | PPFIBP1-006 | 875 | 170aa | ENSP00000444046.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6Q7 Q86W92 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000537261.1 | PPFIBP1-016 | 616 | 205aa | ENSP00000443324.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YGH8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000538433.1 | PPFIBP1-009 | 609 | 18aa | ENSP00000442462.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542187.1 | PPFIBP1-015 | 585 | 152aa | ENSP00000445132.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H495 F5H6Q7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535575.1 | PPFIBP1-010 | 559 | 86aa | ENSP00000437438.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6Q7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545381.1 | PPFIBP1-004 | 1191 | 281aa | ENSP00000445822.1 | Non stop decay | F5H6Q7 | - | - | |
| ENST00000541633.1 | PPFIBP1-014 | 574 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000534917.1 | PPFIBP1-011 | 937 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540503.1 | PPFIBP1-017 | 566 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540256.1 | PPFIBP1-013 | 424 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |