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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ONECUT1 ENSG00000169856

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Description

one cut homeobox 1 [Source:HGNC Symbol;Acc:8138]

Gene Synonyms

HNF-6, HNF6, HNF6A

Location

Chromosome 15: 53,049,637-53,083,273 reverse strand.

GRCh37:CM000677.1

About this gene

This gene has 4 transcripts (splice variants), 4 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305901.5	ONECUT1-001	1640	465aa	ENSP00000302630.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10150	B2CNW3 Q9UBC0	NM_004498.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560699.2	ONECUT1-003	996	66aa	ENSP00000453718.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570208.2	ONECUT1-005	1638	182aa	ENSP00000476168.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561401.2	ONECUT1-002	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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