Transcript: ENST00000560699.2 ONECUT1-003

Description

one cut homeobox 1 [Source:HGNC Symbol;Acc:8138]

Gene Synonyms

HNF-6, HNF6, HNF6A

Location

About this transcript

This transcript has 2 exons, is associated with 10283 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305901.5	ONECUT1-001	1640	465aa	ENSP00000302630.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10150	B2CNW3 Q9UBC0	NM_004498.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560699.2	ONECUT1-003	996	66aa	ENSP00000453718.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMS2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570208.2	ONECUT1-005	1638	182aa	ENSP00000476168.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561401.2	ONECUT1-002	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 996 bps, Translation length: 66 residues

Version

ENST00000560699.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418459 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.