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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARHGEF40 ENSG00000165801

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Description

Rho guanine nucleotide exchange factor (GEF) 40 [Source:HGNC Symbol;Acc:25516]

Gene Synonyms

FLJ10357, SOLO, solo

Location

Chromosome 14: 21,538,429-21,558,399 forward strand.

GRCh37:CM000676.1

About this gene

This gene has 9 transcripts (splice variants) and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298694.4	ARHGEF40-001	5919	1519aa	ENSP00000298694.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32041	Q8TER5	NM_018071.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000298693.3	ARHGEF40-201	5314	1471aa	ENSP00000298693.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TER5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555038.1	ARHGEF40-004	1796	557aa	ENSP00000451335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3N2 Q86TR4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553709.1	ARHGEF40-003	5204	620aa	ENSP00000452283.1	Nonsense mediated decay		G3V5C1	-	-
ENST00000556399.1	ARHGEF40-002	4902	502aa	ENSP00000451655.1	Nonsense mediated decay		G3V485	-	-
ENST00000555232.1	ARHGEF40-005	3902	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554514.1	ARHGEF40-006	2928	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555052.1	ARHGEF40-008	935	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557498.1	ARHGEF40-009	794	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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