Transcript: ENST00000589835.1 PRODH2-006

Description

proline dehydrogenase (oxidase) 2 [Source:HGNC Symbol;Acc:17325]

Gene Synonyms

HSPOX1

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 2059 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301175.3	PRODH2-001	1677	536aa	ENSP00000301175.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12478	Q9UF12	NM_021232.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589835.1	PRODH2-006	612	73aa	ENSP00000474199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3D8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588266.2	PRODH2-007	567	119aa	ENSP00000465214.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587695.1	PRODH2-003	1956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591694.1	PRODH2-004	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587808.1	PRODH2-008	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 612 bps, Translation length: 73 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000589835.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457477 (version 3)