Transcript: ENST00000587695.1 PRODH2-003

Description

proline dehydrogenase (oxidase) 2 [Source:HGNC Symbol;Acc:17325]

Gene Synonyms

HSPOX1

Location

About this transcript

This transcript has 6 exons, is associated with 6693 variant alleles and maps to 517 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301175.3	PRODH2-001	1677	536aa	ENSP00000301175.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12478	Q9UF12	NM_021232.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589835.1	PRODH2-006	612	73aa	ENSP00000474199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3D8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588266.2	PRODH2-007	567	119aa	ENSP00000465214.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587695.1	PRODH2-003	1956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591694.1	PRODH2-004	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587808.1	PRODH2-008	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,956 bps,

Version

ENST00000587695.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457475 (version 1)