Transcript: ENST00000301175.3 PRODH2-001

Description

proline dehydrogenase (oxidase) 2 [Source:HGNC Symbol;Acc:17325]

Gene Synonyms

HSPOX1

Location

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 6929 variant alleles and maps to 497 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301175.3	PRODH2-001	1677	536aa	ENSP00000301175.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12478	Q9UF12	NM_021232.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589835.1	PRODH2-006	612	73aa	ENSP00000474199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3D8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588266.2	PRODH2-007	567	119aa	ENSP00000465214.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587695.1	PRODH2-003	1956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591694.1	PRODH2-004	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587808.1	PRODH2-008	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,677 bps, Translation length: 536 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UF12

CCDS

This transcript is a member of the Human CCDS set: CCDS12478

Version

ENST00000301175.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452552 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.