Transcript: ENST00000542147.1 PROM2-202

Description

prominin 2 [Source:HGNC Symbol;Acc:20685]

Gene Synonyms

PROML2

Location

Chromosome 2: 95,940,245-95,956,061 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 16 domains and features, is associated with 7818 variant alleles and maps to 851 oligo probes.

Gene

This transcript is a product of gene ENSG00000155066.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317620.9	PROM2-201	4728	834aa	ENSP00000318270.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_001165978.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317668.4	PROM2-001	3824	834aa	ENSP00000318520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_144707.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542147.1	PROM2-202	3547	785aa	ENSP00000442542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N271	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403131.2	PROM2-002	2922	834aa	ENSP00000385716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_001165977.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431567.1	PROM2-005	3767	169aa	ENSP00000402753.1	Nonsense mediated decay		F8WDW5	-	-
ENST00000463580.1	PROM2-006	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462029.1	PROM2-011	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497110.1	PROM2-009	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495540.1	PROM2-010	526	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477767.1	PROM2-007	235	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487138.1	PROM2-003	4455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478295.1	PROM2-008	508	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 3,547 bps, Translation length: 785 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N271

Version

ENST00000542147.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000542147.1 PROM2-202

Summary