Transcript: ENST00000317620.9 PROM2-201

Description

prominin 2 [Source:HGNC Symbol;Acc:20685]

Gene Synonyms

PROML2

Location

Chromosome 2: 95,940,201-95,957,051 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 15 domains and features, is associated with 8214 variant alleles and maps to 882 oligo probes.

Gene

This transcript is a product of gene ENSG00000155066.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317620.9	PROM2-201	4728	834aa	ENSP00000318270.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_001165978.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317668.4	PROM2-001	3824	834aa	ENSP00000318520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_144707.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542147.1	PROM2-202	3547	785aa	ENSP00000442542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N271	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403131.2	PROM2-002	2922	834aa	ENSP00000385716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_001165977.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431567.1	PROM2-005	3767	169aa	ENSP00000402753.1	Nonsense mediated decay		F8WDW5	-	-
ENST00000463580.1	PROM2-006	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462029.1	PROM2-011	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497110.1	PROM2-009	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495540.1	PROM2-010	526	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477767.1	PROM2-007	235	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487138.1	PROM2-003	4455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478295.1	PROM2-008	508	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 4,728 bps, Translation length: 834 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N271

CCDS

This transcript is a member of the Human CCDS set: CCDS2012

Version

ENST00000317620.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000252771 (version 1) OTTHUMT00000338634 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000317620.9 PROM2-201

Summary