Transcript: ENST00000431567.1 PROM2-005

Description

prominin 2 [Source:HGNC Symbol;Acc:20685]

Gene Synonyms

PROML2

Location

Chromosome 2: 95,940,249-95,957,056 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 7 domains and features, is associated with 8198 variant alleles and maps to 732 oligo probes.

Gene

This transcript is a product of gene ENSG00000155066.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317620.9	PROM2-201	4728	834aa	ENSP00000318270.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_001165978.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317668.4	PROM2-001	3824	834aa	ENSP00000318520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_144707.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542147.1	PROM2-202	3547	785aa	ENSP00000442542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N271	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403131.2	PROM2-002	2922	834aa	ENSP00000385716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2012	Q8N271	NM_001165977.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431567.1	PROM2-005	3767	169aa	ENSP00000402753.1	Nonsense mediated decay		F8WDW5	-	-
ENST00000463580.1	PROM2-006	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462029.1	PROM2-011	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497110.1	PROM2-009	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495540.1	PROM2-010	526	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477767.1	PROM2-007	235	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487138.1	PROM2-003	4455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478295.1	PROM2-008	508	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 3, Transcript length: 3,767 bps, Translation length: 169 residues

Version

ENST00000431567.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338637 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000431567.1 PROM2-005

Summary