Transcript: ENST00000486299.1 USP21-006

Description

ubiquitin specific peptidase 21 [Source:HGNC Symbol;Acc:12620]

Gene Synonyms

USP16, USP23

Location

Chromosome 1: 161,130,534-161,132,470 forward strand.

About this transcript

This transcript has 5 exons, is associated with 989 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSG00000143258.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368002.3	USP21-201	2342	565aa	ENSP00000356981.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30920	Q9UK80	NM_001014443.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000289865.8	USP21-001	2195	565aa	ENSP00000289865.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30920	Q9UK80	NM_012475.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368001.1	USP21-002	2095	551aa	ENSP00000356980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UK80	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492950.1	USP21-004	1150	253aa	ENSP00000476344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479344.1	USP21-005	709	117aa	ENSP00000476830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493054.1	USP21-007	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486299.1	USP21-006	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487163.1	USP21-003	2514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485277.1	USP21-009	863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482385.1	USP21-008	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 598 bps,

Version

ENST00000486299.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080806 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000486299.1 USP21-006

Summary