Transcript: ENST00000395996.1 VPS13B-201

Description

vacuolar protein sorting 13 homolog B (yeast) [Source:HGNC Symbol;Acc:2183]

Gene Synonyms

CHS1, COH1, KIAA0532

Location

Chromosome 8: 100,025,494-100,889,807 forward strand.

About this transcript

This transcript has 63 exons, is annotated with 5 domains and features, is associated with 364960 variant alleles and maps to 1578 oligo probes.

Gene

This transcript is a product of gene ENSG00000132549.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395996.1	VPS13B-201	14160	1427aa	ENSP00000379318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7G8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358544.2	VPS13B-002	14094	4022aa	ENSP00000351346.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6280	Q7Z7G8	NM_017890.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357162.2	VPS13B-001	14019	3997aa	ENSP00000349685.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6281	Q7Z7G8	NM_152564.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355155.1	VPS13B-004	2822	863aa	ENSP00000347281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6283	Q7Z7G8 Q8N509	NM_015243.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441350.2	VPS13B-006	1626	415aa	ENSP00000398472.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47903	Q7Z7G8	NM_181661.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521559.1	VPS13B-009	466	155aa	ENSP00000428809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000496144.1	VPS13B-003	5625	1427aa	ENSP00000430900.1	Nonsense mediated decay		Q7Z7G8	-	-
ENST00000521932.1	VPS13B-007	1055	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522802.1	VPS13B-011	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518569.1	VPS13B-012	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521037.1	VPS13B-010	486	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524330.1	VPS13B-013	218	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493587.1	VPS13B-005	3485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 63, Coding exons: 28, Transcript length: 14,160 bps, Translation length: 1,427 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z7G8

Version

ENST00000395996.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000395996.1 VPS13B-201

Summary