Transcript: ENST00000447941.1 PXDN-007

Description

peroxidasin homolog (Drosophila) [Source:HGNC Symbol;Acc:14966]

Gene Synonyms

D2S448, D2S448E, KIAA0230, MG50, PRG2, PXN, VPO, VPO1

Location

Chromosome 2: 1,680,729-1,696,342 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features, is associated with 7930 variant alleles and maps to 182 oligo probes.

Gene

This transcript is a product of gene ENSG00000130508.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252804.4	PXDN-001	6808	1479aa	ENSP00000252804.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46221	Q92626	NM_012293.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000433670.1	PXDN-002	2643	723aa	ENSP00000402738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000425171.1	PXDN-006	720	224aa	ENSP00000398363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4I9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447941.1	PXDN-007	588	196aa	ENSP00000408701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000453308.1	PXDN-009	740	76aa	ENSP00000414098.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483018.1	PXDN-015	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477093.1	PXDN-010	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467191.1	PXDN-014	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477810.1	PXDN-012	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465809.1	PXDN-011	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485177.1	PXDN-008	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478155.1	PXDN-003	3840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493654.1	PXDN-004	2796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493779.1	PXDN-013	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 588 bps, Translation length: 196 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000447941.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322511 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000447941.1 PXDN-007

Summary