Transcript: ENST00000252804.4 PXDN-001

Description

peroxidasin homolog (Drosophila) [Source:HGNC Symbol;Acc:14966]

Gene Synonyms

D2S448, D2S448E, KIAA0230, MG50, PRG2, PXN, VPO, VPO1

Location

Chromosome 2: 1,635,659-1,748,278 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 65 domains and features, is associated with 57685 variant alleles and maps to 877 oligo probes.

Gene

This transcript is a product of gene ENSG00000130508.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252804.4	PXDN-001	6808	1479aa	ENSP00000252804.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46221	Q92626	NM_012293.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433670.1	PXDN-002	2643	723aa	ENSP00000402738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000425171.1	PXDN-006	720	224aa	ENSP00000398363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4I9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447941.1	PXDN-007	588	196aa	ENSP00000408701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000453308.1	PXDN-009	740	76aa	ENSP00000414098.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483018.1	PXDN-015	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477093.1	PXDN-010	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467191.1	PXDN-014	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477810.1	PXDN-012	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465809.1	PXDN-011	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485177.1	PXDN-008	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478155.1	PXDN-003	3840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493654.1	PXDN-004	2796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493779.1	PXDN-013	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 6,808 bps, Translation length: 1,479 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92626

CCDS

This transcript is a member of the Human CCDS set: CCDS46221

Version

ENST00000252804.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000322505 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000252804.4 PXDN-001

Summary