Description
5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:30654]
Gene Synonyms
SEP1
Location
Chromosome 3: 142,137,261-142,166,854 reverse strand.
About this transcript
This transcript has 9 exons, is annotated with 3 domains and features, is associated with 13269 variant alleles and maps to 283 oligo probes.
Gene
This transcript is a product of gene ENSG00000114127.6 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000264951.4 | XRN1-001 | 10143 | 1706aa | ENSP00000264951.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3123 | C9JCZ8 Q8IZH2 | NM_019001.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000498077.2 | XRN1-006 | 5600 | 1160aa | ENSP00000419683.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000392981.2 | XRN1-004 | 5383 | 1694aa | ENSP00000376707.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63801 | C9JCZ8 Q8IZH2 | NM_001282857.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000463916.1 | XRN1-003 | 2075 | 459aa | ENSP00000418404.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E2K3 C9JCZ8 Q8IZH2 | NM_001282859.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000544157.1 | XRN1-201 | 1180 | 249aa | ENSP00000444310.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E2K3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000477237.1 | XRN1-009 | 686 | 165aa | ENSP00000420634.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JCZ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000486211.1 | XRN1-002 | 1180 | 107aa | ENSP00000420786.1 | Nonsense mediated decay | F8WDA0 | - | - | |
ENST00000489241.1 | XRN1-012 | 393 | 63aa | ENSP00000419219.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000465074.1 | XRN1-008 | 643 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000468894.1 | XRN1-013 | 318 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000472697.1 | XRN1-005 | 2652 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000467077.1 | XRN1-014 | 674 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000470537.1 | XRN1-007 | 669 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000472625.1 | XRN1-011 | 420 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000465507.1 | XRN1-010 | 322 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |