Human (GRCh37.p13)
Description

5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:30654]

Gene Synonyms

SEP1

About this transcript

This transcript has 5 exons, is associated with 7238 variant alleles and maps to 106 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000264951.4XRN1-001101431706aaENSP00000264951.4
 
Protein coding
CCDS3123C9JCZ8 Q8IZH2 NM_019001.3GENCODE basic
ENST00000498077.2XRN1-00656001160aaENSP00000419683.2
 
Protein coding
--CDS 5' incomplete
ENST00000392981.2XRN1-00453831694aaENSP00000376707.2
 
Protein coding
CCDS63801C9JCZ8 Q8IZH2 NM_001282857.1GENCODE basic
ENST00000463916.1XRN1-0032075459aaENSP00000418404.1
 
Protein coding
B4E2K3 C9JCZ8 Q8IZH2
NM_001282859.1GENCODE basic
ENST00000544157.1XRN1-2011180249aaENSP00000444310.1
 
Protein coding
B4E2K3 -GENCODE basic
ENST00000477237.1XRN1-009686165aaENSP00000420634.1
 
Protein coding
C9JCZ8 -CDS 3' incomplete
ENST00000486211.1XRN1-0021180107aaENSP00000420786.1
 
Nonsense mediated decay
F8WDA0 --
ENST00000489241.1XRN1-01239363aaENSP00000419219.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000465074.1XRN1-008643No protein-
 
Processed transcript
---
ENST00000468894.1XRN1-013318No protein-
 
Processed transcript
---
ENST00000472697.1XRN1-0052652No protein-
 
Retained intron
---
ENST00000467077.1XRN1-014674No protein-
 
Retained intron
---
ENST00000470537.1XRN1-007669No protein-
 
Retained intron
---
ENST00000472625.1XRN1-011420No protein-
 
Retained intron
---
ENST00000465507.1XRN1-010322No protein-
 
Retained intron
---
Statistics

Exons: 5, Coding exons: 3, Transcript length: 393 bps, Translation length: 63 residues

Incomplete CDS

CDS 5' incomplete

Version

ENST00000489241.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000354308 (version 1)