Description
5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:30654]
Gene Synonyms
SEP1
Location
Chromosome 3: 142,025,449-142,166,904 reverse strand.
About this transcript
This transcript has 42 exons, is annotated with 12 domains and features, is associated with 59248 variant alleles and maps to 1331 oligo probes.
Gene
This transcript is a product of gene ENSG00000114127.6 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000264951.4 | XRN1-001 | 10143 | 1706aa | ENSP00000264951.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3123 | C9JCZ8 Q8IZH2 | NM_019001.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000498077.2 | XRN1-006 | 5600 | 1160aa | ENSP00000419683.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000392981.2 | XRN1-004 | 5383 | 1694aa | ENSP00000376707.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63801 | C9JCZ8 Q8IZH2 | NM_001282857.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000463916.1 | XRN1-003 | 2075 | 459aa | ENSP00000418404.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E2K3 C9JCZ8 Q8IZH2 | NM_001282859.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000544157.1 | XRN1-201 | 1180 | 249aa | ENSP00000444310.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E2K3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000477237.1 | XRN1-009 | 686 | 165aa | ENSP00000420634.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JCZ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000486211.1 | XRN1-002 | 1180 | 107aa | ENSP00000420786.1 | Nonsense mediated decay | F8WDA0 | - | - | |
| ENST00000489241.1 | XRN1-012 | 393 | 63aa | ENSP00000419219.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000465074.1 | XRN1-008 | 643 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468894.1 | XRN1-013 | 318 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000472697.1 | XRN1-005 | 2652 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467077.1 | XRN1-014 | 674 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000470537.1 | XRN1-007 | 669 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000472625.1 | XRN1-011 | 420 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465507.1 | XRN1-010 | 322 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |