Transcript: ENST00000340611.4 BRAT1-001

Description

BRCA1-associated ATM activator 1 [Source:HGNC Symbol;Acc:21701]

Gene Synonyms

BAAT1, C7orf27, MGC22916, RMFSL

Location

About this transcript

This transcript has 14 exons, is annotated with 11 domains and features, is associated with 12153 variant alleles and maps to 554 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340611.4	BRAT1-001	2915	821aa	ENSP00000339637.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5334	F8WDN5 Q6PJG6	NM_152743.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421712.1	BRAT1-005	823	168aa	ENSP00000409209.2	Nonsense mediated decay		-	-	-
ENST00000473879.1	BRAT1-006	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493232.1	BRAT1-004	5360	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469750.1	BRAT1-002	5226	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467558.1	BRAT1-003	4440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,915 bps, Translation length: 821 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PJG6

CCDS

This transcript is a member of the Human CCDS set: CCDS5334

Version

ENST00000340611.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000239305 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.