Transcript: ENST00000467558.1 BRAT1-003

Description

BRCA1-associated ATM activator 1 [Source:HGNC Symbol;Acc:21701]

Gene Synonyms

BAAT1, C7orf27, MGC22916, RMFSL

Location

About this transcript

This transcript has 10 exons, is associated with 11229 variant alleles and maps to 659 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340611.4	BRAT1-001	2915	821aa	ENSP00000339637.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5334	F8WDN5 Q6PJG6	NM_152743.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421712.1	BRAT1-005	823	168aa	ENSP00000409209.2	Nonsense mediated decay		-	-	-
ENST00000473879.1	BRAT1-006	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493232.1	BRAT1-004	5360	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469750.1	BRAT1-002	5226	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467558.1	BRAT1-003	4440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 4,440 bps,

Version

ENST00000467558.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000325027 (version 1)