Transcript: ENST00000438189.2 CABP4-002

Description

calcium binding protein 4 [Source:HGNC Symbol;Acc:1386]

Gene Synonyms

CSNB2B

Location

Chromosome 11: 67,219,886-67,226,699 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features, is associated with 3562 variant alleles and maps to 365 oligo probes.

Gene

This transcript is a product of gene ENSG00000175544.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325656.5	CABP4-001	1299	275aa	ENSP00000324960.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8166	P57796	NM_145200.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438189.2	CABP4-002	1426	170aa	ENSP00000401555.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P57796	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545777.1	CABP4-006	682	128aa	ENSP00000439145.1	Nonsense mediated decay		F5H3E8	-	-
ENST00000542025.2	CABP4-005	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538060.1	CABP4-004	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542233.1	CABP4-007	353	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545040.1	CABP4-003	914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,426 bps, Translation length: 170 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P57796

Version

ENST00000438189.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397667 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000438189.2 CABP4-002

Summary