Transcript: ENST00000545040.1 CABP4-003

Description

calcium binding protein 4 [Source:HGNC Symbol;Acc:1386]

Gene Synonyms

CSNB2B

Location

About this transcript

This transcript has 2 exons, is associated with 523 variant alleles and maps to 65 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000438189.2	CABP4-002	1426	170aa	ENSP00000401555.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P57796	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000325656.5	CABP4-001	1299	275aa	ENSP00000324960.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8166	P57796	NM_145200.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545777.1	CABP4-006	682	128aa	ENSP00000439145.1	Nonsense mediated decay		F5H3E8	-	-
ENST00000542025.2	CABP4-005	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538060.1	CABP4-004	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542233.1	CABP4-007	353	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545040.1	CABP4-003	914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 914 bps,

Version

ENST00000545040.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397669 (version 1)