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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CABP4 ENSG00000175544

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Description

calcium binding protein 4 [Source:HGNC Symbol;Acc:1386]

Gene Synonyms

CSNB2B

Location

Chromosome 11: 67,219,877-67,226,699 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 7 transcripts (splice variants), 12 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325656.5	CABP4-001	1299	275aa	ENSP00000324960.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8166	P57796	NM_145200.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438189.2	CABP4-002	1426	170aa	ENSP00000401555.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P57796	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545777.1	CABP4-006	682	128aa	ENSP00000439145.1	Nonsense mediated decay		F5H3E8	-	-
ENST00000542025.2	CABP4-005	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538060.1	CABP4-004	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542233.1	CABP4-007	353	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545040.1	CABP4-003	914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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