Description
structural maintenance of chromosomes 6 [Source:HGNC Symbol;Acc:20466]
Gene Synonyms
FLJ22116, SMC-6, SMC6L1, hSMC6
Location
Chromosome 2: 17,845,079-17,981,509 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 9 transcripts (splice variants), 215 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000448223.2 | SMC6-002 | 5233 | 1091aa | ENSP00000404092.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1690 | C9JEF0 Q96SB8 | NM_001142286.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000351948.4 | SMC6-001 | 5173 | 1091aa | ENSP00000323439.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1690 | C9JEF0 Q96SB8 | NM_024624.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000402989.1 | SMC6-006 | 3729 | 1091aa | ENSP00000384539.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1690 | C9JEF0 Q96SB8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000381272.4 | SMC6-201 | 3724 | 1117aa | ENSP00000370672.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEF0 C9JMN1 Q96SB8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000446852.1 | SMC6-003 | 2460 | 740aa | ENSP00000408644.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEF0 C9JMN1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000428868.1 | SMC6-007 | 544 | 57aa | ENSP00000415352.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEF0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430591.1 | SMC6-005 | 480 | 22aa | ENSP00000412246.1 | Nonsense mediated decay | H7C3J8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000489535.1 | SMC6-008 | 586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481708.1 | SMC6-004 | 3897 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
