Transcript: ENST00000381272.4 SMC6-201

Description

structural maintenance of chromosomes 6 [Source:HGNC Symbol;Acc:20466]

Gene Synonyms

FLJ22116, SMC-6, SMC6L1, hSMC6

Location

Chromosome 2: 17,846,666-17,935,070 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 16 domains and features, is associated with 37409 variant alleles and maps to 624 oligo probes.

Gene

This transcript is a product of gene ENSG00000163029.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000448223.2	SMC6-002	5233	1091aa	ENSP00000404092.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1690	C9JEF0 Q96SB8	NM_001142286.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351948.4	SMC6-001	5173	1091aa	ENSP00000323439.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1690	C9JEF0 Q96SB8	NM_024624.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402989.1	SMC6-006	3729	1091aa	ENSP00000384539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1690	C9JEF0 Q96SB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381272.4	SMC6-201	3724	1117aa	ENSP00000370672.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEF0 C9JMN1 Q96SB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446852.1	SMC6-003	2460	740aa	ENSP00000408644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEF0 C9JMN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000428868.1	SMC6-007	544	57aa	ENSP00000415352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEF0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430591.1	SMC6-005	480	22aa	ENSP00000412246.1	Nonsense mediated decay		H7C3J8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489535.1	SMC6-008	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481708.1	SMC6-004	3897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 27, Transcript length: 3,724 bps, Translation length: 1,117 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96SB8

Version

ENST00000381272.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381272.4 SMC6-201

Summary