Description
integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:HGNC Symbol;Acc:6141]
Gene Synonyms
CD49e, FNRA, VLA5A
Location
Chromosome 12: 54,789,045-54,813,244 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 13 transcripts (splice variants) and 17 paralogues.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000293379.4 | ITGA5-001 | 4444 | 1049aa | ENSP00000293379.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8880 | P08648 | NM_002205.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000547197.1 | ITGA5-012 | 757 | 119aa | ENSP00000450267.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000435631.2 | ITGA5-002 | 1240 | 137aa | ENSP00000405865.2 | Nonsense mediated decay | B4E3F4 | - | - | |
ENST00000553071.1 | ITGA5-003 | 1013 | 120aa | ENSP00000447347.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000547744.1 | ITGA5-005 | 547 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000552564.1 | ITGA5-004 | 4996 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000552387.1 | ITGA5-013 | 1333 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000552431.1 | ITGA5-011 | 588 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000550141.1 | ITGA5-007 | 582 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000552583.1 | ITGA5-009 | 568 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000551861.1 | ITGA5-006 | 536 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000549601.1 | ITGA5-010 | 505 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000551564.1 | ITGA5-008 | 354 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |