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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDH9 ENSG00000113100

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Description

cadherin 9, type 2 (T1-cadherin) [Source:HGNC Symbol;Acc:1768]

Location

Chromosome 5: 26,880,709-27,121,257 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 5 transcripts (splice variants) and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000231021.4	CDH9-001	3079	789aa	ENSP00000231021.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3893	D6RBT9 E7EPN0 Q9ULB4	NM_016279.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513289.1	CDH9-005	556	132aa	ENSP00000426239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBT9 E7EPN0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511822.1	CDH9-002	532	81aa	ENSP00000422538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBT9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505020.1	CDH9-004	1836	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505045.1	CDH9-003	1801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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