Description
SRY (sex determining region Y)-box 6 [Source:HGNC Symbol;Acc:16421]
Gene Synonyms
HSSOX6, SOXD
Location
Chromosome 11: 15,987,995-16,761,138 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 18 transcripts (splice variants), 19 paralogues and is associated with 2 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000352083.6 | SOX6-201 | 8925 | 828aa | ENSP00000339876.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PN02 E9PQ67 E9PQL4 P35712 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000396356.3 | SOX6-202 | 8865 | 808aa | ENSP00000379644.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7821 | E9PN02 E9PQ67 E9PQL4 P35712 | NM_033326.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000316399.6 | SOX6-001 | 8808 | 808aa | ENSP00000324948.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7821 | E9PN02 E9PQ67 E9PQL4 P35712 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000528252.1 | SOX6-002 | 2707 | 801aa | ENSP00000432134.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53604 | E9PN02 E9PQ67 E9PQL4 P35712 | NM_001145811.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000527619.1 | SOX6-003 | 2699 | 804aa | ENSP00000434455.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53605 | E9PN02 E9PQ67 E9PQL4 P35712 | NM_017508.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000528429.1 | SOX6-012 | 2656 | 828aa | ENSP00000433233.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PN02 E9PQ67 E9PQL4 P35712 | NM_001145819.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000533411.1 | SOX6-009 | 586 | 159aa | ENSP00000436170.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PN02 E9PQ67 E9PQL4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000529469.1 | SOX6-008 | 549 | 79aa | ENSP00000432596.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PQ67 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000526673.1 | SOX6-010 | 534 | 139aa | ENSP00000434892.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PN02 E9PQ67 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000530378.1 | SOX6-011 | 1818 | 159aa | ENSP00000432577.1 | Nonsense mediated decay | E9PN02 E9PQ67 E9PQ78 | - | - | |
ENST00000533658.1 | SOX6-006 | 1198 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000524520.1 | SOX6-015 | 709 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000525835.1 | SOX6-017 | 660 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000527840.1 | SOX6-007 | 574 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000525259.1 | SOX6-016 | 574 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000524650.1 | SOX6-013 | 534 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000531297.1 | SOX6-014 | 429 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000533870.1 | SOX6-005 | 7224 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |