Human (GRCh37.p13)
Description

SRY (sex determining region Y)-box 6 [Source:HGNC Symbol;Acc:16421]

Gene Synonyms

HSSOX6, SOXD

Location
About this transcript

This transcript has 15 exons, is annotated with 17 domains and features, is associated with 175219 variant alleles and maps to 422 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000352083.6SOX6-2018925828aaENSP00000339876.6
 
Protein coding
E9PN02 E9PQ67 E9PQL4
P35712
-GENCODE basic
ENST00000396356.3SOX6-2028865808aaENSP00000379644.3
 
Protein coding
CCDS7821E9PN02 E9PQ67 E9PQL4
P35712
NM_033326.3GENCODE basic
ENST00000316399.6SOX6-0018808808aaENSP00000324948.6
 
Protein coding
CCDS7821E9PN02 E9PQ67 E9PQL4
P35712
-GENCODE basic
ENST00000528252.1SOX6-0022707801aaENSP00000432134.1
 
Protein coding
CCDS53604E9PN02 E9PQ67 E9PQL4
P35712
NM_001145811.1GENCODE basic
ENST00000527619.1SOX6-0032699804aaENSP00000434455.1
 
Protein coding
CCDS53605E9PN02 E9PQ67 E9PQL4
P35712
NM_017508.2GENCODE basic
ENST00000528429.1SOX6-0122656828aaENSP00000433233.1
 
Protein coding
E9PN02 E9PQ67 E9PQL4
P35712
NM_001145819.1GENCODE basic
ENST00000533411.1SOX6-009586159aaENSP00000436170.1
 
Protein coding
E9PN02 E9PQ67 E9PQL4
-CDS 3' incomplete
ENST00000529469.1SOX6-00854979aaENSP00000432596.1
 
Protein coding
E9PQ67 -CDS 3' incomplete
ENST00000526673.1SOX6-010534139aaENSP00000434892.1
 
Protein coding
E9PN02 E9PQ67 -CDS 3' incomplete
ENST00000530378.1SOX6-0111818159aaENSP00000432577.1
 
Nonsense mediated decay
E9PN02 E9PQ67 E9PQ78
--
ENST00000533658.1SOX6-0061198No protein-
 
Processed transcript
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ENST00000524520.1SOX6-015709No protein-
 
Processed transcript
---
ENST00000525835.1SOX6-017660No protein-
 
Processed transcript
---
ENST00000527840.1SOX6-007574No protein-
 
Processed transcript
---
ENST00000525259.1SOX6-016574No protein-
 
Processed transcript
---
ENST00000524650.1SOX6-013534No protein-
 
Processed transcript
---
ENST00000531297.1SOX6-014429No protein-
 
Processed transcript
---
ENST00000533870.1SOX6-0057224No protein-
 
Retained intron
---
Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,699 bps, Translation length: 804 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35712

CCDS

This transcript is a member of the Human CCDS set: CCDS53605

Version

ENST00000527619.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000386810 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.