Human (GRCh37.p13)
Description

SRY (sex determining region Y)-box 6 [Source:HGNC Symbol;Acc:16421]

Gene Synonyms

HSSOX6, SOXD

Location
About this transcript

This transcript has 16 exons, is annotated with 16 domains and features, is associated with 175223 variant alleles and maps to 404 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000352083.6SOX6-2018925828aaENSP00000339876.6
 
Protein coding
E9PN02 E9PQ67 E9PQL4
P35712
-GENCODE basic
ENST00000396356.3SOX6-2028865808aaENSP00000379644.3
 
Protein coding
CCDS7821E9PN02 E9PQ67 E9PQL4
P35712
NM_033326.3GENCODE basic
ENST00000316399.6SOX6-0018808808aaENSP00000324948.6
 
Protein coding
CCDS7821E9PN02 E9PQ67 E9PQL4
P35712
-GENCODE basic
ENST00000528252.1SOX6-0022707801aaENSP00000432134.1
 
Protein coding
CCDS53604E9PN02 E9PQ67 E9PQL4
P35712
NM_001145811.1GENCODE basic
ENST00000527619.1SOX6-0032699804aaENSP00000434455.1
 
Protein coding
CCDS53605E9PN02 E9PQ67 E9PQL4
P35712
NM_017508.2GENCODE basic
ENST00000528429.1SOX6-0122656828aaENSP00000433233.1
 
Protein coding
E9PN02 E9PQ67 E9PQL4
P35712
NM_001145819.1GENCODE basic
ENST00000533411.1SOX6-009586159aaENSP00000436170.1
 
Protein coding
E9PN02 E9PQ67 E9PQL4
-CDS 3' incomplete
ENST00000529469.1SOX6-00854979aaENSP00000432596.1
 
Protein coding
E9PQ67 -CDS 3' incomplete
ENST00000526673.1SOX6-010534139aaENSP00000434892.1
 
Protein coding
E9PN02 E9PQ67 -CDS 3' incomplete
ENST00000530378.1SOX6-0111818159aaENSP00000432577.1
 
Nonsense mediated decay
E9PN02 E9PQ67 E9PQ78
--
ENST00000533658.1SOX6-0061198No protein-
 
Processed transcript
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ENST00000524520.1SOX6-015709No protein-
 
Processed transcript
---
ENST00000525835.1SOX6-017660No protein-
 
Processed transcript
---
ENST00000527840.1SOX6-007574No protein-
 
Processed transcript
---
ENST00000525259.1SOX6-016574No protein-
 
Processed transcript
---
ENST00000524650.1SOX6-013534No protein-
 
Processed transcript
---
ENST00000531297.1SOX6-014429No protein-
 
Processed transcript
---
ENST00000533870.1SOX6-0057224No protein-
 
Retained intron
---
Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,656 bps, Translation length: 828 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35712

Version

ENST00000528429.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000386811 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.