Human (GRCh37.p13)
Description

vacuolar protein sorting 13 homolog B (yeast) [Source:HGNC Symbol;Acc:2183]

Gene Synonyms

CHS1, COH1, KIAA0532

Location

Chromosome 8: 100,025,494-100,889,808 forward strand.

GRCh37:CM000670.1

About this gene

This gene has 13 transcripts (splice variants), 3 paralogues and is associated with 4 phenotypes.

Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000358544.2VPS13B-002140944022aa
 
Protein coding
CCDS6280Q7Z7G8 NM_017890.4Ensembl CanonicalGENCODE Basic
ENST00000395996.1VPS13B-201141601427aa
 
Protein coding
Q7Z7G8 -GENCODE Basic
ENST00000357162.2VPS13B-001140193997aa
 
Protein coding
CCDS6281Q7Z7G8 NM_152564.4GENCODE Basic
ENST00000355155.1VPS13B-0042822863aa
 
Protein coding
CCDS6283Q7Z7G8 Q8N509 NM_015243.2GENCODE Basic
ENST00000441350.2VPS13B-0061626415aa
 
Protein coding
CCDS47903Q7Z7G8 NM_181661.2GENCODE Basic
ENST00000521559.1VPS13B-009466155aa
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000496144.1VPS13B-00356251427aa
 
Nonsense mediated decay
Q7Z7G8 --
ENST00000521932.1VPS13B-0071055No protein
 
Processed transcript
---
ENST00000522802.1VPS13B-011570No protein
 
Processed transcript
---
ENST00000518569.1VPS13B-012531No protein
 
Processed transcript
---
ENST00000521037.1VPS13B-010486No protein
 
Processed transcript
---
ENST00000524330.1VPS13B-013218No protein
 
Processed transcript
---
ENST00000493587.1VPS13B-0053485No protein
 
Retained intron
---
Name

VPS13B (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q7Z7G8

CCDS

This gene is a member of the Human CCDS set: CCDS47903.1, CCDS6280.1, CCDS6281.1, CCDS6283.1

Ensembl version

ENSG00000132549.14

Other assemblies

This gene maps to 99,013,266-99,877,580 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:
OTTHUMG00000140383 (version 2)

Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Contigs

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