Transcript: ENST00000490555.1 UBE2V1-012

Description

ubiquitin-conjugating enzyme E2 variant 1 [Source:HGNC Symbol;Acc:12494]

Gene Synonyms

CIR1, CROC-1, CROC1, DDVIT1, DDVit-1, EDAF-1, EDPF-1, EDPF1, MMS2, UBE2V, UEV-1, UEV-2, UEV1, UEV1A, UEV2

Location

Chromosome 20: 48,699,394-48,729,670 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 13297 variant alleles and maps to 300 oligo probes.

Gene

This transcript is a product of gene ENSG00000244687.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340309.3	UBE2V1-003	2536	170aa	ENSP00000340305.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13426	Q13404	NM_021988.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371677.3	UBE2V1-002	2459	170aa	ENSP00000360742.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13426	Q13404	NM_199144.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415862.2	UBE2V1-001	2387	103aa	ENSP00000407770.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13427	Q13404	NM_001257394.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420027.2	UBE2V1-201	2179	103aa	ENSP00000395264.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13427	Q13404	NM_022442.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371674.3	UBE2V1-004	2133	147aa	ENSP00000360739.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33483	Q13404	NM_001257395.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371657.5	UBE2V1-005	1973	105aa	ENSP00000360720.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58775	Q13404	NM_001257396.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483534.1	UBE2V1-007	1155	89aa	ENSP00000421351.1	Nonsense mediated decay		D6RG00	-	-
ENST00000396059.3	UBE2V1-010	1983	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462217.1	UBE2V1-008	1095	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470565.1	UBE2V1-009	728	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461960.1	UBE2V1-006	649	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473860.1	UBE2V1-018	639	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490289.1	UBE2V1-011	628	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000432266.1	UBE2V1-016	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468926.1	UBE2V1-014	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486653.1	UBE2V1-017	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492371.2	UBE2V1-013	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472923.1	UBE2V1-015	421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467839.1	UBE2V1-020	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493090.1	UBE2V1-019	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490555.1	UBE2V1-012	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 549 bps,

Version

ENST00000490555.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080540 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000490555.1 UBE2V1-012

Summary