Transcript: ENST00000340309.3 UBE2V1-003

Description

ubiquitin-conjugating enzyme E2 variant 1 [Source:HGNC Symbol;Acc:12494]

Gene Synonyms

CIR1, CROC-1, CROC1, DDVIT1, DDVit-1, EDAF-1, EDPF-1, EDPF1, MMS2, UBE2V, UEV-1, UEV-2, UEV1, UEV1A, UEV2

Location

Chromosome 20: 48,697,661-48,732,491 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 15402 variant alleles and maps to 483 oligo probes.

Gene

This transcript is a product of gene ENSG00000244687.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340309.3	UBE2V1-003	2536	170aa	ENSP00000340305.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13426	Q13404	NM_021988.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371677.3	UBE2V1-002	2459	170aa	ENSP00000360742.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13426	Q13404	NM_199144.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415862.2	UBE2V1-001	2387	103aa	ENSP00000407770.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13427	Q13404	NM_001257394.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420027.2	UBE2V1-201	2179	103aa	ENSP00000395264.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13427	Q13404	NM_022442.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371674.3	UBE2V1-004	2133	147aa	ENSP00000360739.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33483	Q13404	NM_001257395.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371657.5	UBE2V1-005	1973	105aa	ENSP00000360720.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58775	Q13404	NM_001257396.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483534.1	UBE2V1-007	1155	89aa	ENSP00000421351.1	Nonsense mediated decay		D6RG00	-	-
ENST00000396059.3	UBE2V1-010	1983	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462217.1	UBE2V1-008	1095	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470565.1	UBE2V1-009	728	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461960.1	UBE2V1-006	649	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473860.1	UBE2V1-018	639	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490289.1	UBE2V1-011	628	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000432266.1	UBE2V1-016	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468926.1	UBE2V1-014	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486653.1	UBE2V1-017	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492371.2	UBE2V1-013	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472923.1	UBE2V1-015	421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467839.1	UBE2V1-020	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493090.1	UBE2V1-019	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490555.1	UBE2V1-012	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,536 bps, Translation length: 170 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13404

CCDS

This transcript is a member of the Human CCDS set: CCDS13426

Version

ENST00000340309.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080531 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340309.3 UBE2V1-003

Summary