Transcript: ENST00000487659.1 MRPL20-002

Description

mitochondrial ribosomal protein L20 [Source:HGNC Symbol;Acc:14478]

Gene Synonyms

FLJ10024, L20mt, MRP-L20

Location

About this transcript

This transcript has 3 exons, is associated with 3500 variant alleles and maps to 451 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000482352.1	MRPL20-003	1049	155aa	ENSP00000460924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z746	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344843.7	MRPL20-001	721	149aa	ENSP00000341082.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26	Q9BYC9	NM_017971.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492508.1	MRPL20-004	588	66aa	ENSP00000459994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2X1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000493287.1	MRPL20-006	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477686.1	MRPL20-005	314	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487659.1	MRPL20-002	1693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,693 bps,

Version

ENST00000487659.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000008140 (version 2)