Transcript: ENST00000482352.1 MRPL20-003

Description

mitochondrial ribosomal protein L20 [Source:HGNC Symbol;Acc:14478]

Gene Synonyms

FLJ10024, L20mt, MRP-L20

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 1507 variant alleles and maps to 256 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000482352.1	MRPL20-003	1049	155aa	ENSP00000460924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z746	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344843.7	MRPL20-001	721	149aa	ENSP00000341082.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26	Q9BYC9	NM_017971.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492508.1	MRPL20-004	588	66aa	ENSP00000459994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2X1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000493287.1	MRPL20-006	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477686.1	MRPL20-005	314	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487659.1	MRPL20-002	1693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,049 bps, Translation length: 155 residues

Version

ENST00000482352.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000008141 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.