Transcript: ENST00000467025.1 TAPBP-010

Description

TAP binding protein (tapasin) [Source:HGNC Symbol;Acc:11566]

Gene Synonyms

NGS17, TAPA, TPN, TPSN

Location

Chromosome 6: 33,272,886-33,281,992 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 3950 variant alleles and maps to 950 oligo probes.

Gene

This transcript is a product of gene ENSG00000231925.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434618.2	TAPBP-001	3759	448aa	ENSP00000395701.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34426	O15533	NM_172209.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426633.2	TAPBP-008	1888	504aa	ENSP00000404833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34428	-	NM_172208.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456592.2	TAPBP-209	1693	448aa	ENSP00000387803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YTI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475304.1	TAPBP-007	1686	466aa	ENSP00000417949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AB90	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489157.1	TAPBP-006	1299	361aa	ENSP00000419659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34427	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467025.1	TAPBP-010	751	192aa	ENSP00000417523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA35	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480730.1	TAPBP-002	2202	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000437116.2	TAPBP-003	1239	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476333.1	TAPBP-004	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 751 bps, Translation length: 192 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000467025.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355487 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000467025.1 TAPBP-010

Summary