Transcript: ENST00000434618.2 TAPBP-001

Description

TAP binding protein (tapasin) [Source:HGNC Symbol;Acc:11566]

Gene Synonyms

NGS17, TAPA, TPN, TPSN

Location

Chromosome 6: 33,267,471-33,282,164 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 6592 variant alleles and maps to 2102 oligo probes.

Gene

This transcript is a product of gene ENSG00000231925.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434618.2	TAPBP-001	3759	448aa	ENSP00000395701.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34426	O15533	NM_172209.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426633.2	TAPBP-008	1888	504aa	ENSP00000404833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34428	-	NM_172208.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456592.2	TAPBP-209	1693	448aa	ENSP00000387803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YTI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475304.1	TAPBP-007	1686	466aa	ENSP00000417949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AB90	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489157.1	TAPBP-006	1299	361aa	ENSP00000419659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34427	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467025.1	TAPBP-010	751	192aa	ENSP00000417523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA35	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480730.1	TAPBP-002	2202	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000437116.2	TAPBP-003	1239	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476333.1	TAPBP-004	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,759 bps, Translation length: 448 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15533

CCDS

This transcript is a member of the Human CCDS set: CCDS34426

Version

ENST00000434618.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000076127 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000434618.2 TAPBP-001

Summary