Transcript: ENST00000376049.4 AIF1-002

Description

allograft inflammatory factor 1 [Source:HGNC Symbol;Acc:352]

Gene Synonyms

AIF-1, Em:AF129756.17, G1, IBA1, IRT-1, IRT1

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 508 variant alleles and maps to 746 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376059.3	AIF1-001	711	147aa	ENSP00000365227.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4706	I3WTX1 P55008 Q4V347	NM_001623.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337917.7	AIF1-004	607	161aa	ENSP00000338776.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3WTX1 Q5STX8	NM_004847.3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000376049.4	AIF1-002	524	93aa	ENSP00000365217.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34398	I3WTX1 P55008	NM_032955.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466820.1	AIF1-006	1180	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497362.1	AIF1-003	810	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 524 bps, Translation length: 93 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55008

CCDS

This transcript is a member of the Human CCDS set: CCDS34398

Version

ENST00000376049.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000076514 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.