Transcript: ENST00000466820.1 AIF1-006

Description

allograft inflammatory factor 1 [Source:HGNC Symbol;Acc:352]

Gene Synonyms

AIF-1, Em:AF129756.17, G1, IBA1, IRT-1, IRT1

Location

About this transcript

This transcript has 4 exons, is associated with 855 variant alleles and maps to 1467 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376059.3	AIF1-001	711	147aa	ENSP00000365227.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4706	I3WTX1 P55008 Q4V347	NM_001623.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337917.7	AIF1-004	607	161aa	ENSP00000338776.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3WTX1 Q5STX8	NM_004847.3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000376049.4	AIF1-002	524	93aa	ENSP00000365217.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34398	I3WTX1 P55008	NM_032955.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466820.1	AIF1-006	1180	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497362.1	AIF1-003	810	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,180 bps,

Version

ENST00000466820.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000259316 (version 1)