Transcript: ENST00000374741.3 OXLD1-001

Description

oxidoreductase-like domain containing 1 [Source:HGNC Symbol;Acc:27901]

Gene Synonyms

C17orf90, MGC104712

Location

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 1007 variant alleles and maps to 282 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000571503.1	OXLD1-006	803	92aa	ENSP00000466256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L208	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374741.3	OXLD1-001	620	147aa	ENSP00000363873.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32766	Q5BKU9	NM_001039842.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571757.1	OXLD1-003	923	92aa	ENSP00000459191.1	Nonsense mediated decay		I3L208	-	-
ENST00000575992.1	OXLD1-005	821	79aa	ENSP00000459374.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571092.1	OXLD1-004	553	92aa	ENSP00000459281.1	Nonsense mediated decay		I3L208	-	-
ENST00000573786.1	OXLD1-007	678	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575963.1	OXLD1-002	1600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 620 bps, Translation length: 147 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5BKU9

CCDS

This transcript is a member of the Human CCDS set: CCDS32766

Version

ENST00000374741.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000440380 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.