Transcript: ENST00000575963.1 OXLD1-002

Description

oxidoreductase-like domain containing 1 [Source:HGNC Symbol;Acc:27901]

Gene Synonyms

C17orf90, MGC104712

Location

About this transcript

This transcript has 1 exon, is associated with 1047 variant alleles and maps to 333 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000571503.1	OXLD1-006	803	92aa	ENSP00000466256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L208	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374741.3	OXLD1-001	620	147aa	ENSP00000363873.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32766	Q5BKU9	NM_001039842.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571757.1	OXLD1-003	923	92aa	ENSP00000459191.1	Nonsense mediated decay		I3L208	-	-
ENST00000575992.1	OXLD1-005	821	79aa	ENSP00000459374.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571092.1	OXLD1-004	553	92aa	ENSP00000459281.1	Nonsense mediated decay		I3L208	-	-
ENST00000573786.1	OXLD1-007	678	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575963.1	OXLD1-002	1600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 1,600 bps,

Version

ENST00000575963.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000440381 (version 1)